Type: Package
Package: Unico
Title: Unified Cross-Omics Deconvolution
Version: 0.1.0
Authors@R: c(
    person("Zeyuan", "Chen", , "johnsonchen@cs.ucla.edu", role = c("aut", "cre")),
    person("Elior", "Rahmani", role = "aut")
  )
Description: UNIfied Cross-Omics deconvolution (Unico) deconvolves
        standard 2-dimensional bulk matrices of samples by features
        into a 3-dimensional tensors representing samples by features
        by cell types. Unico stands out as the first principled
        model-based deconvolution method that is theoretically
        justified for any heterogeneous genomic data. For more details
        see Chen and Rahmani et al. (2024)
        <doi:10.1101/2024.01.27.577588>.
License: GPL-3
URL: https://cozygene.github.io/Unico/
BugReports: https://github.com/cozygene/Unico/issues
Depends: R (>= 4.0.0)
Imports: compositions, config, data.table, futile.logger, MASS,
        matrixcalc, matrixStats, mgcv, nloptr, parallel, pbapply,
        pracma, stats, testit, utils
Suggests: egg, hexbin, knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr, rmarkdown
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.2.3
Config/pak/sysreqs: cmake
Repository: https://cozygene.r-universe.dev
Date/Publication: 2024-02-23 18:24:05 UTC
RemoteUrl: https://github.com/cozygene/unico
RemoteRef: HEAD
RemoteSha: 5d44ded4f6ce93f545e103212305e4a7e8734ec1
NeedsCompilation: no
Packaged: 2026-06-12 08:40:16 UTC; root
Author: Zeyuan Chen [aut, cre],
  Elior Rahmani [aut]
Maintainer: Zeyuan Chen <johnsonchen@cs.ucla.edu>